Resources

We have developed a number of new resources that we are making publicly available for the community.

Among these, we have an extensive collection of particle- and phycosphere-associated marine bacteria, with physiological characterization and newly sequenced genomes; genetic tools for several of these new strains and curated, constraint-based models of metabolic reactions for key marine bacteria.

Genome Highlights

Name

Date of Isolation

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4B03 Alteromonas sp. ALT199

2019

Biocyc

Isolation Source: chitin hydrogel
Ecological context: Coastal seawater

Publication doi

Publication doi

NCBI BioSample

N/A

Closest taxonomic relative

d__Bacteria;
p__Proteobacteria;
c__Gammaproteobacteria;
o__Enterobacterales;
f__Alteromonadaceae;
g__Alteromonas;
s__

GCF_000597705.1

C1M14 Altermonas sp.

2019

Biocyc

Isolation Source: carageenan
Culture medium/method for isolation:
Colony plating- defined minimal carageenan
Ecological context: Coastal seawater

Publication doi

Publication doi

NCBI BioSample

N/A

Closest taxonomic relative

Gammaproteobacteria_Alteromonadales_Alteromonadaceae_Alteromonas

[by 16S]

D2R05 Aliiglaciecola lipolytica

2019

Biocyc

Isolation Source: chitosan
Culture medium/method for isolation:
Colony plating- Marine broth (DIFCO 2216)
Ecological context: Coastal seawater

Publication doi

Publication doi

NCBI BioSample

N/A

Closest taxonomic relative

d__Bacteria;
p__Proteobacteria;
c__Gammaproteobacteria;
o__Enterobacterales;
f__Alteromonadaceae;
g__Aliiglaciecola;
s__Aliiglaciecola lipolytica

GCF_000314975.1

See All Genomes

Protocol Highlights

Name

Description

Link

Protocols are coming soon!

See All Protocols